STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ63737.1Lipoprotein, putative; COG3488 Predicted thiol oxidoreductase. (478 aa)    
Predicted Functional Partners:
EAQ63738.1
Hypothetical protein; COG3489 Predicted periplasmic lipoprotein.
 
  
 0.986
EAQ63739.1
COG3490 Uncharacterized protein conserved in bacteria.
 
  
 0.982
EAQ63736.1
Hypothetical protein; COG3487 Uncharacterized iron-regulated protein.
 
    0.978
EAQ65793.1
Tat (twin-arginine translocation) pathway signal sequence domain protein.
   
    0.630
EAQ64746.1
Thiamin biosynthesis lipoprotein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
  
    0.614
EAQ63501.1
COG1840 ABC-type Fe3+ transport system, periplasmic component.
 
    0.589
EAQ63502.1
COG1178 ABC-type Fe3+ transport system, permease component.
  
    0.555
EAQ64942.1
COG0810 Periplasmic protein TonB, links inner and outer membranes.
  
    0.463
EAQ64659.1
BFD-like (2Fe-2S)-binding region protein; COG2906 Bacterioferritin-associated ferredoxin.
  
    0.458
EAQ63740.1
Signaling protein with a sensor domain, HAMP, GGDEF and EAL domains; COG2199 FOG: GGDEF domain.
       0.456
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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