STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ63738.1Hypothetical protein; COG3489 Predicted periplasmic lipoprotein. (357 aa)    
Predicted Functional Partners:
EAQ63737.1
Lipoprotein, putative; COG3488 Predicted thiol oxidoreductase.
 
  
 0.986
EAQ63739.1
COG3490 Uncharacterized protein conserved in bacteria.
 
  
 0.978
EAQ63736.1
Hypothetical protein; COG3487 Uncharacterized iron-regulated protein.
 
  
 0.969
EAQ64513.1
Hypothetical protein; COG1858 Cytochrome c peroxidase.
 
     0.500
EAQ67497.1
Hypothetical protein; COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain).
  
     0.492
EAQ63357.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
  
     0.460
EAQ63740.1
Signaling protein with a sensor domain, HAMP, GGDEF and EAL domains; COG2199 FOG: GGDEF domain.
       0.456
EAQ64497.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
     0.455
EAQ64165.1
COG3170 Tfp pilus assembly protein FimV.
  
     0.450
EAQ65440.1
Periplasmic Sensor Hybrid Histidine Kinase.
  
     0.448
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.