STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ64378.1COG3214 Uncharacterized protein conserved in bacteria. (421 aa)    
Predicted Functional Partners:
EAQ64379.1
Hypothetical protein.
       0.648
EAQ64377.1
Acetyltransferase; COG3153 Predicted acetyltransferase.
       0.563
EAQ64376.1
Hypothetical protein; COG0421 Spermidine synthase.
 
     0.515
EAQ64380.1
Hypothetical protein.
       0.504
folE2
Hypothetical protein; Converts GTP to 7,8-dihydroneopterin triphosphate.
   
    0.422
EAQ64317.1
COG2821 Membrane-bound lytic murein transglycosylase.
   
    0.408
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.