STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ64401.1COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (317 aa)    
Predicted Functional Partners:
EAQ67722.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.628
EAQ66901.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.612
EAQ67418.1
Putative transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.597
EAQ67752.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.590
EAQ67801.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.579
EAQ63902.1
Transcriptional regulator (LysR family protein); COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.557
EAQ65706.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.556
EAQ67776.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.551
EAQ67723.1
Transcriptional Regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.540
EAQ63752.1
Gcv operon regulator; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.533
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
Server load: very high (>100%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.