STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ63808.1DsrC-like protein; Part of a sulfur-relay system. (106 aa)    
Predicted Functional Partners:
EAQ63805.1
Hypothetical protein; COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction.
 
 
 0.996
mnmA
tRNA methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
   
 0.952
EAQ63806.1
Putative sulfur oxidation protein DsrF; COG2923 Uncharacterized protein involved in the oxidation of intracellular sulfur.
  
  
 0.880
EAQ63807.1
Hypothetical protein; COG0620 Methionine synthase II (cobalamin-independent).
       0.773
EAQ66838.1
Glycosyl transferase, family 3; COG0547 Anthranilate phosphoribosyltransferase.
 
    0.589
EAQ63804.1
COG0670 Integral membrane protein, interacts with FtsH; Belongs to the BI1 family.
     
 0.584
EAQ63594.1
COG1252 NADH dehydrogenase, FAD-containing subunit.
    
 0.535
thiI
Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
      
 0.477
EAQ67160.1
Iron-sulfur cluster-binding protein; COG0247 Fe-S oxidoreductase.
   
 
 0.437
EAQ65566.1
FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal; COG0277 FAD/FMN-containing dehydrogenases.
 
 
 
 0.431
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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