STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ66547.1Transcriptional regulator, putative; COG1396 Predicted transcriptional regulators. (184 aa)    
Predicted Functional Partners:
EAQ66270.1
Nucleotide sugar dehydrogenase; COG1004 Predicted UDP-glucose 6-dehydrogenase.
  
 
 0.743
EAQ66399.1
Polysaccharide biosynthesis protein; COG1086 Predicted nucleoside-diphosphate sugar epimerases.
  
 
 0.706
EAQ65685.1
COG1086 Predicted nucleoside-diphosphate sugar epimerases.
  
 
 0.706
hldD
ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.
  
 
 0.672
EAQ64854.1
NAD-dependent epimerase/dehydratase; COG0451 Nucleoside-diphosphate-sugar epimerases.
  
 
 0.672
EAQ63720.1
Amino acid adenylation; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
     
 0.665
EAQ66026.1
Transcriptional regulator MmsR; COG2207 AraC-type DNA-binding domain-containing proteins.
  
 0.652
EAQ65323.1
Hypothetical protein; COG2207 AraC-type DNA-binding domain-containing proteins.
  
 0.652
EAQ66015.1
Chain length regulator (capsular polysaccharide biosynthesis); COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
  
 
 0.644
EAQ65541.1
COG0246 Mannitol-1-phosphate/altronate dehydrogenases.
    
 0.623
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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