STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ66580.1Bacterial extracellular solute-binding protein, family 3; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. (249 aa)    
Predicted Functional Partners:
EAQ66105.1
Probable sensory transduction system regulatory protein; COG2199 FOG: GGDEF domain.
   
 0.761
EAQ67304.1
Probable sensor/response regulator hybrid; COG0642 Signal transduction histidine kinase.
   
 0.761
EAQ64832.1
Two-component hybrid sensor and regulator; COG0642 Signal transduction histidine kinase.
   
 0.747
EAQ64407.1
Bacterial extracellular solute-binding protein, family 3; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.740
EAQ63304.1
COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.739
EAQ66759.1
Hypothetical protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.735
EAQ66140.1
Hypothetical protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.732
EAQ64678.1
Hypothetical protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.725
EAQ67672.1
ABC transporter, periplasmic substrate-binding protein-related protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.719
EAQ67610.1
Hypothetical protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.715
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.