STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ63487.1Hypothetical protein; COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; Belongs to the bacterial solute-binding protein 9 family. (334 aa)    
Predicted Functional Partners:
EAQ63488.1
COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components.
 
 0.999
EAQ63489.1
ABC transporter, ATP-binding protein; COG1121 ABC-type Mn/Zn transport systems, ATPase component.
 
 
 0.997
EAQ65053.1
High-affinity zinc uptake system membrane protein ZnuB; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components.
 
 0.980
znuC
High-affinity zinc uptake system ATP-binding protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
  
 
 0.936
EAQ64691.1
Hypothetical protein; COG0523 Putative GTPases (G3E family).
  
 
 0.858
EAQ63486.1
Hypothetical protein; COG3683 ABC-type uncharacterized transport system, periplasmic component.
 
     0.803
rpsN
30S ribosomal subunit protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
  
 0.730
rpmB
COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.728
EAQ65217.1
Zinc ABC transporter, periplasmic zinc-binding protein; COG4531 ABC-type Zn2+ transport system, periplasmic component/surface adhesin; Belongs to the bacterial solute-binding protein 9 family.
 
  
0.701
EAQ63484.1
Hypothetical membrane protein; COG2215 ABC-type uncharacterized transport system, permease component; Belongs to the NiCoT transporter (TC 2.A.52) family.
 
     0.683
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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