STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ65556.1Transcriptional regulator, (GntR family protein); COG2188 Transcriptional regulators. (251 aa)    
Predicted Functional Partners:
EAQ63493.1
COG1820 N-acetylglucosamine-6-phosphate deacetylase.
 
  
 0.815
EAQ63496.1
Putative periplasmic binding (signal peptide) abc transporter protein; COG1653 ABC-type sugar transport system, periplasmic component.
 
 
   0.791
EAQ63497.1
COG1175 ABC-type sugar transport systems, permease components.
 
     0.700
EAQ67346.1
Repressor protein PhnR, putative; COG2188 Transcriptional regulators.
  
     0.692
EAQ63498.1
COG0395 ABC-type sugar transport system, permease component.
 
     0.641
EAQ63494.1
COG2971 Predicted N-acetylglucosamine kinase.
 
     0.610
EAQ64684.1
Putative transcriptional regulatory protein; COG1940 Transcriptional regulator/sugar kinase.
 
 
 0.586
EAQ65555.1
Maltose/mannitol ABC transporter, ATP-binding protein, putative; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
  
    0.551
EAQ66026.1
Transcriptional regulator MmsR; COG2207 AraC-type DNA-binding domain-containing proteins.
  
  
 0.482
EAQ65323.1
Hypothetical protein; COG2207 AraC-type DNA-binding domain-containing proteins.
  
  
 0.482
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.