STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ65624.1Hypothetical protein. (295 aa)    
Predicted Functional Partners:
glgB
Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.562
EAQ64304.1
Isoamylase N-terminal domain protein; COG0296 1,4-alpha-glucan branching enzyme.
 
 
 0.516
EAQ63595.1
Alpha-glucosidase; COG0366 Glycosidases.
    
 0.493
EAQ66126.1
Putative sucrose phosphorylase; COG0366 Glycosidases.
    
 0.493
EAQ64921.1
Alpha-glucosidase; COG0366 Glycosidases.
    
 0.493
EAQ65625.1
Hypothetical protein.
  
    0.485
EAQ67180.1
Glycogen debranching enzyme; COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases; Belongs to the glycosyl hydrolase 13 family.
    
 0.484
EAQ66139.1
Uncharacterized secreted protein, containing cell adhesion domain.
     
 0.481
EAQ65103.1
Glucan 1,4-beta-glucosidase; COG1472 Beta-glucosidase-related glycosidases.
  
 
  0.480
EAQ66868.1
Class II aldolase/adducin domain protein; COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases.
  
  
 0.476
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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