STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ65716.1COG2916 DNA-binding protein H-NS; Belongs to the histone-like protein H-NS family. (131 aa)    
Predicted Functional Partners:
EAQ65753.1
Putative structural protein.
  
    0.686
EAQ65901.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
     0.607
EAQ65900.1
Hypothetical protein.
  
     0.606
EAQ63982.1
Hypothetical protein.
  
     0.606
EAQ65899.1
COG4913 Uncharacterized protein conserved in bacteria.
  
     0.594
lptE
Rare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane; Belongs to the LptE lipoprotein family.
 
    0.573
EAQ65201.1
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
     0.552
EAQ64497.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
     0.546
EAQ66668.1
Effector protein B, substrate of the Dot/Icm secretion system; COG5022 Myosin heavy chain.
  
     0.533
EAQ67487.1
Hypothetical protein.
  
     0.504
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.