STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ65738.1Hypothetical protein. (297 aa)    
Predicted Functional Partners:
EAQ65737.1
COG1250 3-hydroxyacyl-CoA dehydrogenase.
 
  
 0.961
EAQ65740.1
Thioesterase-like; COG0824 Predicted thioesterase.
 
 
 0.884
EAQ63930.1
Hypothetical protein; COG1878 Predicted metal-dependent hydrolase.
 
    0.678
EAQ63931.1
Hypothetical protein; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain.
 
    0.664
EAQ65736.1
Transporter, BCCT family protein; COG1292 Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family.
       0.651
EAQ65735.1
COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain.
 
     0.545
kynB
Putative cyclase; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation.
  
    0.523
EAQ67097.1
Hypothetical protein; COG3837 Uncharacterized conserved protein, contains double-stranded beta-helix domain.
  
    0.493
EAQ65743.1
3-oxoacid CoA-transferase; COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.
    
 0.491
EAQ63762.1
Thioesterase family protein; COG1607 Acyl-CoA hydrolase.
    
 0.484
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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