STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ64968.1COG2003 DNA repair proteins; Belongs to the UPF0758 family. (224 aa)    
Predicted Functional Partners:
EAQ65386.1
COG1792 Cell shape-determining protein.
  
  
 0.827
EAQ66245.1
Competence protein F; COG1040 Predicted amidophosphoribosyltransferases.
 
    0.809
EAQ65384.1
Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
 
  
 0.795
maf
Maf-like protein; COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; Belongs to the Maf family.
 
  
 0.793
EAQ66983.1
Putative orphan protein.
  
    0.714
EAQ64969.1
Phosphopantothenoylcysteine synthetase/decarboxylase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.
       0.676
EAQ66596.1
DNA internalization-related competence protein; COG0658 Predicted membrane metal-binding protein.
 
  
 0.658
dut
DeoxyUTP pyrophosphatase subfamily 1; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
       0.621
EAQ65126.1
COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake.
  
  
 0.608
rpmB
COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
     
 0.596
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.