STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ65115.1Hypothetical protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. (246 aa)    
Predicted Functional Partners:
EAQ65119.1
COG0511 Biotin carboxyl carrier protein.
  
 
 0.997
EAQ66752.1
Allophanate hydrolase subunit 2; COG0439 Biotin carboxylase.
  
 
 0.992
EAQ65118.1
Urea amidolyase; COG1984 Allophanate hydrolase subunit 2.
 
 0.990
EAQ65117.1
COG2049 Allophanate hydrolase subunit 1.
 
 
 0.980
EAQ64900.1
Hypothetical protein; COG2049 Allophanate hydrolase subunit 1.
 
 0.975
EAQ64901.1
Allophanate hydrolase domain protein/urea amidolyase-like protein; COG1984 Allophanate hydrolase subunit 2.
 
 0.960
EAQ64819.1
Putative proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
 
  0.883
EAQ65116.1
Carbamoyl-phosphate synthase, putative; COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
    0.746
EAQ64898.1
Hypothetical protein; Belongs to the D-glutamate cyclase family.
 
    0.742
EAQ65113.1
Sugar ABC transporter ATP-binding protein; COG1129 ABC-type sugar transport system, ATPase component.
       0.699
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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