Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAQ63243.1 | EAQ65126.1 | MED121_24209 | MED121_10410 | Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake. | 0.738 |
| EAQ63243.1 | EAQ66245.1 | MED121_24209 | MED121_06170 | Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | Competence protein F; COG1040 Predicted amidophosphoribosyltransferases. | 0.520 |
| EAQ63243.1 | EAQ66596.1 | MED121_24209 | MED121_11750 | Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | DNA internalization-related competence protein; COG0658 Predicted membrane metal-binding protein. | 0.629 |
| EAQ63520.1 | EAQ65126.1 | MED121_19936 | MED121_10410 | Hypothetical protein; COG0468 RecA/RadA recombinase. | COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake. | 0.727 |
| EAQ63520.1 | EAQ66245.1 | MED121_19936 | MED121_06170 | Hypothetical protein; COG0468 RecA/RadA recombinase. | Competence protein F; COG1040 Predicted amidophosphoribosyltransferases. | 0.405 |
| EAQ63520.1 | EAQ66596.1 | MED121_19936 | MED121_11750 | Hypothetical protein; COG0468 RecA/RadA recombinase. | DNA internalization-related competence protein; COG0658 Predicted membrane metal-binding protein. | 0.587 |
| EAQ63520.1 | recA | MED121_19936 | MED121_20236 | Hypothetical protein; COG0468 RecA/RadA recombinase. | Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.850 |
| EAQ63520.1 | recA-2 | MED121_19936 | MED121_19941 | Hypothetical protein; COG0468 RecA/RadA recombinase. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.525 |
| EAQ64586.1 | EAQ65126.1 | MED121_21585 | MED121_10410 | Type 4 prepilin-like proteins leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake. | 0.846 |
| EAQ64586.1 | EAQ66596.1 | MED121_21585 | MED121_11750 | Type 4 prepilin-like proteins leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | DNA internalization-related competence protein; COG0658 Predicted membrane metal-binding protein. | 0.830 |
| EAQ65126.1 | EAQ63243.1 | MED121_10410 | MED121_24209 | COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake. | Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.738 |
| EAQ65126.1 | EAQ63520.1 | MED121_10410 | MED121_19936 | COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake. | Hypothetical protein; COG0468 RecA/RadA recombinase. | 0.727 |
| EAQ65126.1 | EAQ64586.1 | MED121_10410 | MED121_21585 | COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake. | Type 4 prepilin-like proteins leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.846 |
| EAQ65126.1 | EAQ65254.1 | MED121_10410 | MED121_18475 | COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake. | Probable magnesium-chelatase; COG0606 Predicted ATPase with chaperone activity. | 0.869 |
| EAQ65126.1 | EAQ65282.1 | MED121_10410 | MED121_18615 | COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake. | Mg chelatase-related protein; COG0606 Predicted ATPase with chaperone activity. | 0.863 |
| EAQ65126.1 | EAQ66245.1 | MED121_10410 | MED121_06170 | COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake. | Competence protein F; COG1040 Predicted amidophosphoribosyltransferases. | 0.867 |
| EAQ65126.1 | EAQ66596.1 | MED121_10410 | MED121_11750 | COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake. | DNA internalization-related competence protein; COG0658 Predicted membrane metal-binding protein. | 0.807 |
| EAQ65126.1 | fliP | MED121_10410 | MED121_06030 | COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake. | Flagellar transport protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. | 0.670 |
| EAQ65126.1 | recA | MED121_10410 | MED121_20236 | COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake. | Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.723 |
| EAQ65126.1 | recA-2 | MED121_10410 | MED121_19941 | COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.715 |
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