STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ64817.1Hypothetical extracellular solute-binding protein, family 7; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. (370 aa)    
Predicted Functional Partners:
EAQ63744.1
Hypothetical protein; COG4664 TRAP-type mannitol/chloroaromatic compound transport system, large permease component.
 
  
 0.789
EAQ64823.1
Hypothetical permease component of C4 dicarboxylate transporter; COG4664 TRAP-type mannitol/chloroaromatic compound transport system, large permease component.
 
  
 0.789
EAQ67332.1
Putative C4-dicarboxylate transporter family protein, DctM subunit; COG4664 TRAP-type mannitol/chloroaromatic compound transport system, large permease component.
 
  
 0.788
EAQ63743.1
Hypothetical protein; COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
  
 0.785
EAQ64824.1
Tripartite ATP-independent periplasmic transporter, DctQ component; COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
  
 0.785
EAQ67333.1
C4-dicarboxylate transporter family protein, DctQ subunit; COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
  
 0.784
EAQ64816.1
DNA helicase II; COG0210 Superfamily I DNA and RNA helicases.
       0.480
EAQ64815.1
Hypothetical protein.
       0.466
EAQ67334.1
Extracellular solute-binding protein, family 7; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
  
  
 
0.465
EAQ64896.1
Probable DctM (C4-dicarboxylate permease, large subunit); COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
     0.431
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.