STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ64911.1COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. (475 aa)    
Predicted Functional Partners:
EAQ64912.1
Periplasmic substrate-binding protein/sensor histidine kinase; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 
 0.953
EAQ65751.1
Two-component sensor NtrB; COG3852 Signal transduction histidine kinase, nitrogen specific.
 0.920
EAQ65376.1
DNA-directed RNA polymerase subunit N; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.904
EAQ66105.1
Probable sensory transduction system regulatory protein; COG2199 FOG: GGDEF domain.
  
 0.877
EAQ67304.1
Probable sensor/response regulator hybrid; COG0642 Signal transduction histidine kinase.
  
 0.849
EAQ67275.1
Serine/threonine kinase with two-component sensor domain; COG0642 Signal transduction histidine kinase.
 
 0.845
EAQ67336.1
Sensor histidine kinase; COG0591 Na+/proline symporter.
  
 0.841
EAQ64832.1
Two-component hybrid sensor and regulator; COG0642 Signal transduction histidine kinase.
  
 0.824
EAQ67552.1
COG0642 Signal transduction histidine kinase.
  
 0.810
EAQ64702.1
Periplasmic substrate-binding protein/sensor histidine kinase; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 
 0.803
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.