STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ64942.1COG0810 Periplasmic protein TonB, links inner and outer membranes. (265 aa)    
Predicted Functional Partners:
EAQ66594.1
COG0848 Biopolymer transport protein.
 
 
 0.959
EAQ66595.1
MotA/TolQ/ExbB proton channel; COG0811 Biopolymer transport proteins.
 
 
 0.955
tolR
Biopolymer transport protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.895
EAQ63912.1
COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
 
 0.886
EAQ67816.1
COG0848 Biopolymer transport protein.
  
 
 0.886
EAQ67817.1
COG0811 Biopolymer transport proteins.
 
 
 0.863
tolQ
TolQ protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.856
EAQ67815.1
COG0848 Biopolymer transport protein.
  
 
 0.832
EAQ64214.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
 0.823
EAQ66667.1
B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase,repressor of metE and metF; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
 0.780
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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