STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ66625.1clpB protein; COG0542 ATPases with chaperone activity, ATP-binding subunit; Belongs to the ClpA/ClpB family. (894 aa)    
Predicted Functional Partners:
EAQ66633.1
COG3517 Uncharacterized protein conserved in bacteria.
 
 0.977
EAQ66630.1
COG3520 Uncharacterized protein conserved in bacteria.
 
 
 0.951
EAQ66627.1
COG3522 Uncharacterized protein conserved in bacteria.
 
 
 0.946
EAQ66626.1
COG3455 Uncharacterized protein conserved in bacteria.
 
  
 0.944
EAQ66634.1
COG3516 Uncharacterized protein conserved in bacteria.
 
 
 0.942
EAQ66621.1
COG3523 Uncharacterized protein conserved in bacteria.
 
 
 0.938
clpP
Putative ATP-dependent Clp protease, proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
  
 
 0.936
EAQ66494.1
COG3517 Uncharacterized protein conserved in bacteria.
 
 0.930
EAQ66493.1
COG3517 Uncharacterized protein conserved in bacteria.
 
 0.926
EAQ66628.1
COG3521 Uncharacterized protein conserved in bacteria.
 
  
 0.919
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.