EAQ66626.1 protein (Marinomonas sp. MED121) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EAQ66626.1

COG3455 Uncharacterized protein conserved in bacteria. (258 aa)

Predicted Functional Partners:

EAQ66628.1

0.978

EAQ66633.1

0.974

EAQ66627.1

0.971

EAQ66630.1

0.965

EAQ66631.1

0.964

EAQ66634.1

0.964

EAQ66621.1

0.962

EAQ66632.1

0.959

EAQ66629.1

0.957

EAQ66622.1

0.947

Your Current Organism:

Marinomonas sp. MED121

NCBI taxonomy Id: 314277
Other names: M. sp. MED121

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EAQ66621.1	EAQ66622.1	MED121_11875	MED121_11880	COG3523 Uncharacterized protein conserved in bacteria.	COG3515 Uncharacterized protein conserved in bacteria.	0.970
EAQ66621.1	EAQ66626.1	MED121_11875	MED121_11900	COG3523 Uncharacterized protein conserved in bacteria.	COG3455 Uncharacterized protein conserved in bacteria.	0.962
EAQ66621.1	EAQ66627.1	MED121_11875	MED121_11905	COG3523 Uncharacterized protein conserved in bacteria.	COG3522 Uncharacterized protein conserved in bacteria.	0.962
EAQ66621.1	EAQ66628.1	MED121_11875	MED121_11910	COG3523 Uncharacterized protein conserved in bacteria.	COG3521 Uncharacterized protein conserved in bacteria.	0.946
EAQ66621.1	EAQ66629.1	MED121_11875	MED121_11915	COG3523 Uncharacterized protein conserved in bacteria.	Hypothetical protein; COG3456 Uncharacterized conserved protein, contains FHA domain.	0.925
EAQ66621.1	EAQ66630.1	MED121_11875	MED121_11920	COG3523 Uncharacterized protein conserved in bacteria.	COG3520 Uncharacterized protein conserved in bacteria.	0.954
EAQ66621.1	EAQ66631.1	MED121_11875	MED121_11925	COG3523 Uncharacterized protein conserved in bacteria.	COG3519 Uncharacterized protein conserved in bacteria.	0.928
EAQ66621.1	EAQ66632.1	MED121_11875	MED121_11930	COG3523 Uncharacterized protein conserved in bacteria.	COG3518 Uncharacterized protein conserved in bacteria.	0.925
EAQ66621.1	EAQ66633.1	MED121_11875	MED121_11935	COG3523 Uncharacterized protein conserved in bacteria.	COG3517 Uncharacterized protein conserved in bacteria.	0.963
EAQ66621.1	EAQ66634.1	MED121_11875	MED121_11940	COG3523 Uncharacterized protein conserved in bacteria.	COG3516 Uncharacterized protein conserved in bacteria.	0.957
EAQ66622.1	EAQ66621.1	MED121_11880	MED121_11875	COG3515 Uncharacterized protein conserved in bacteria.	COG3523 Uncharacterized protein conserved in bacteria.	0.970
EAQ66622.1	EAQ66626.1	MED121_11880	MED121_11900	COG3515 Uncharacterized protein conserved in bacteria.	COG3455 Uncharacterized protein conserved in bacteria.	0.947
EAQ66622.1	EAQ66627.1	MED121_11880	MED121_11905	COG3515 Uncharacterized protein conserved in bacteria.	COG3522 Uncharacterized protein conserved in bacteria.	0.945
EAQ66622.1	EAQ66628.1	MED121_11880	MED121_11910	COG3515 Uncharacterized protein conserved in bacteria.	COG3521 Uncharacterized protein conserved in bacteria.	0.959
EAQ66622.1	EAQ66629.1	MED121_11880	MED121_11915	COG3515 Uncharacterized protein conserved in bacteria.	Hypothetical protein; COG3456 Uncharacterized conserved protein, contains FHA domain.	0.933
EAQ66622.1	EAQ66630.1	MED121_11880	MED121_11920	COG3515 Uncharacterized protein conserved in bacteria.	COG3520 Uncharacterized protein conserved in bacteria.	0.983
EAQ66622.1	EAQ66631.1	MED121_11880	MED121_11925	COG3515 Uncharacterized protein conserved in bacteria.	COG3519 Uncharacterized protein conserved in bacteria.	0.940
EAQ66622.1	EAQ66632.1	MED121_11880	MED121_11930	COG3515 Uncharacterized protein conserved in bacteria.	COG3518 Uncharacterized protein conserved in bacteria.	0.955
EAQ66622.1	EAQ66633.1	MED121_11880	MED121_11935	COG3515 Uncharacterized protein conserved in bacteria.	COG3517 Uncharacterized protein conserved in bacteria.	0.955
EAQ66622.1	EAQ66634.1	MED121_11880	MED121_11940	COG3515 Uncharacterized protein conserved in bacteria.	COG3516 Uncharacterized protein conserved in bacteria.	0.956