STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ66637.1vgrG protein; COG3501 Uncharacterized protein conserved in bacteria. (614 aa)    
Predicted Functional Partners:
EAQ66495.1
COG3516 Uncharacterized protein conserved in bacteria.
 
  
 0.916
EAQ66630.1
COG3520 Uncharacterized protein conserved in bacteria.
 
 
 0.898
EAQ66634.1
COG3516 Uncharacterized protein conserved in bacteria.
 
  
 0.880
EAQ66626.1
COG3455 Uncharacterized protein conserved in bacteria.
 
  
 0.867
EAQ66483.1
COG3455 Uncharacterized protein conserved in bacteria.
 
  
 0.866
EAQ66497.1
COG3515 Uncharacterized protein conserved in bacteria.
 
  
 0.864
EAQ66493.1
COG3517 Uncharacterized protein conserved in bacteria.
 
  
 0.862
EAQ66494.1
COG3517 Uncharacterized protein conserved in bacteria.
 
  
 0.862
EAQ66633.1
COG3517 Uncharacterized protein conserved in bacteria.
 
  
 0.862
EAQ66636.1
Hypothetical protein.
 
   
 0.855
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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