STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ66838.1Glycosyl transferase, family 3; COG0547 Anthranilate phosphoribosyltransferase. (345 aa)    
Predicted Functional Partners:
EAQ65800.1
COG0147 Anthranilate/para-aminobenzoate synthases component I.
 
 0.979
EAQ65419.1
COG0147 Anthranilate/para-aminobenzoate synthases component I.
 
 0.976
trpF
COG0135 Phosphoribosylanthranilate isomerase; Belongs to the TrpF family.
 
 
 0.933
trpC
COG0134 Indole-3-glycerol phosphate synthase; Belongs to the TrpC family.
 
 
 0.923
EAQ66938.1
Chorismate mutase/prephenate dehydrogenase; COG1605 Chorismate mutase.
  
 
 0.876
EAQ65796.1
COG0512 Anthranilate/para-aminobenzoate synthases component II.
 
 
 0.866
EAQ65799.1
COG0512 Anthranilate/para-aminobenzoate synthases component II.
 
 
 0.864
EAQ66438.1
Glutamine amidotransferase of anthranilate synthase orpara-aminobenzoate synthase; COG0512 Anthranilate/para-aminobenzoate synthases component II.
 
 
 0.859
EAQ66839.1
Molybdopterin oxidoreductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
   
 0.847
trpB
Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
  
 
 0.823
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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