STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ66848.1COG3707 Response regulator with putative antiterminator output domain. (190 aa)    
Predicted Functional Partners:
EAQ66847.1
Nitrate transporter, putative; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
  
 0.959
EAQ65634.1
COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
 
 
 0.910
EAQ65759.1
Probable binding protein component of ABC transporter; COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
  
 
 0.888
EAQ66839.1
Molybdopterin oxidoreductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.828
EAQ66842.1
FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COG1251 NAD(P)H-nitrite reductase.
 
  
 0.816
EAQ66845.1
COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
  
 0.792
EAQ63809.1
Uroporphyrin-III C-methyltransferase, C-terminal:Siroheme synthase,N-terminal; COG0007 Uroporphyrinogen-III methylase; Belongs to the precorrin methyltransferase family.
  
 
 0.781
EAQ66844.1
Putative nitrate transporter; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
   
 0.638
EAQ66935.1
30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
  
    0.631
EAQ65621.1
COG0631 Serine/threonine protein phosphatase.
 
  
 0.627
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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