STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ66911.1Biosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. (631 aa)    
Predicted Functional Partners:
EAQ63436.1
Porphyromonas-type peptidyl-arginine deiminase; COG2957 Peptidylarginine deiminase and related enzymes; Belongs to the agmatine deiminase family.
 
  
 0.961
EAQ65577.1
Agmatinase, putative; COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family.
  
 
 0.906
EAQ63147.1
Agmatinase; COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family.
  
 
 0.906
argH
COG0165 Argininosuccinate lyase.
     
 0.857
speE
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
    
 0.854
EAQ63323.1
COG1982 Arginine/lysine/ornithine decarboxylases.
     
 0.781
EAQ65252.1
Putative aminotransferase protein; COG0436 Aspartate/tyrosine/aromatic aminotransferase.
  
 
  0.738
EAQ64222.1
Aminotransferase, classes I and II; COG0436 Aspartate/tyrosine/aromatic aminotransferase.
  
 
  0.738
EAQ64774.1
Hypothetical protein; COG1834 N-Dimethylarginine dimethylaminohydrolase.
    
 0.576
EAQ63286.1
COG0436 Aspartate/tyrosine/aromatic aminotransferase.
  
 
  0.473
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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