STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ66969.1Peptide ABC transporter, ATP-binding protein; COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily. (560 aa)    
Predicted Functional Partners:
EAQ66968.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.979
EAQ66967.1
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
 0.966
EAQ66966.1
COG0747 ABC-type dipeptide transport system, periplasmic component.
 
 
 0.892
EAQ65065.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.799
EAQ64360.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.790
EAQ66970.1
Putative hydratase; COG3971 2-keto-4-pentenoate hydratase.
       0.786
EAQ65106.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.769
EAQ64837.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.743
EAQ67165.1
ABC transporter, permease protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.731
EAQ66839.1
Molybdopterin oxidoreductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
  0.724
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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