STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ67059.1COG2834 Outer membrane lipoprotein-sorting protein. (272 aa)    
Predicted Functional Partners:
EAQ67058.1
Hypothetical protein; COG1033 Predicted exporters of the RND superfamily.
   
 0.949
EAQ67060.1
Hypothetical protein.
 
     0.944
EAQ64242.1
Hypothetical protein; COG1033 Predicted exporters of the RND superfamily.
   
 0.798
EAQ63958.1
Hypothetical protein; COG4591 ABC-type transport system, involved in lipoprotein release, permease component.
 
 
 
 0.730
EAQ63956.1
Putative ABC transporter, ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
   
 
 0.695
EAQ66599.1
Hypothetical protein; COG4591 ABC-type transport system, involved in lipoprotein release, permease component.
   
 
 0.686
EAQ66776.1
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
   
 
 0.686
EAQ63144.1
COG0577 ABC-type antimicrobial peptide transport system, permease component.
   
 
 0.679
EAQ65936.1
ABC transporter, ATP-binding domain; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
   
 
 0.678
lolD
Hypothetical protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
   
 
 0.678
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.