STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ67322.1SoxR protein; COG0789 Predicted transcriptional regulators. (149 aa)    
Predicted Functional Partners:
EAQ66105.1
Probable sensory transduction system regulatory protein; COG2199 FOG: GGDEF domain.
   
 0.810
EAQ64121.1
Hypothetical protein; COG2214 DnaJ-class molecular chaperone.
  
 
 0.774
EAQ65602.1
Chaperone protein dnaJ (Heat shock protein J) (HSP40), co-chaperone with DnaK; COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain.
  
 
 0.774
EAQ65603.1
COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain.
  
 
 0.774
EAQ64315.1
Hypothetical protein; COG2214 DnaJ-class molecular chaperone.
  
 
 0.774
EAQ67275.1
Serine/threonine kinase with two-component sensor domain; COG0642 Signal transduction histidine kinase.
  
 0.747
EAQ64322.1
Glutamine amidotransferase, class-II; COG0069 Glutamate synthase domain 2.
    
 0.747
EAQ63116.1
Glutamate synthase large chain precursor; COG0067 Glutamate synthase domain 1.
    
 0.747
EAQ66054.1
Sensory box/GGDEF/EAL domain protein; COG2202 FOG: PAS/PAC domain.
    
 0.738
EAQ65794.1
GGDEF domain protein; COG2203 FOG: GAF domain.
    
 0.738
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.