STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ67398.1Cysteine desulfurase SufE subunit; COG2166 SufE protein probably involved in Fe-S center assembly. (136 aa)    
Predicted Functional Partners:
EAQ67401.1
Selenocysteine lyase/Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 0.993
EAQ64808.1
Selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 0.990
EAQ67402.1
Cysteine desulfurase activator SufB; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
 
 
 0.930
EAQ67404.1
Cysteine desulfurase activator SufB; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
 
 
 0.930
EAQ67403.1
Cysteine desulfurase activator ATPase; COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component.
 
 
 0.926
EAQ65328.1
Aminotransferase, class V; COG0520 Selenocysteine lyase.
 0.883
EAQ67242.1
Aminotransferase, putative; COG0520 Selenocysteine lyase.
 
 0.856
EAQ67399.1
COG2151 Predicted metal-sulfur cluster biosynthetic enzyme.
 
     0.746
iscS
Cysteine desulfurase used in synthesis of Fe-S cluster (tRNA4-thiouridine sulfur transferase); Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins.
    
 0.645
EAQ67400.1
Fe-S cluster assembly scaffold protein; Belongs to the HesB/IscA family.
  
  
 0.572
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.