STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ67402.1Cysteine desulfurase activator SufB; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component. (420 aa)    
Predicted Functional Partners:
EAQ67403.1
Cysteine desulfurase activator ATPase; COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component.
 
 
 0.999
EAQ67404.1
Cysteine desulfurase activator SufB; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
 
 
 0.999
EAQ67401.1
Selenocysteine lyase/Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 
 0.985
EAQ67400.1
Fe-S cluster assembly scaffold protein; Belongs to the HesB/IscA family.
  
 
 0.968
EAQ64808.1
Selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 
 0.936
EAQ67399.1
COG2151 Predicted metal-sulfur cluster biosynthetic enzyme.
 
   
 0.935
EAQ67398.1
Cysteine desulfurase SufE subunit; COG2166 SufE protein probably involved in Fe-S center assembly.
 
 
 0.930
EAQ65328.1
Aminotransferase, class V; COG0520 Selenocysteine lyase.
 
 
 0.881
EAQ64807.1
COG2166 SufE protein probably involved in Fe-S center assembly.
 
 
 0.817
EAQ67242.1
Aminotransferase, putative; COG0520 Selenocysteine lyase.
 
 
 0.779
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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