STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ67457.1COG3097 Uncharacterized protein conserved in bacteria; Belongs to the UPF0267 family. (106 aa)    
Predicted Functional Partners:
EAQ67456.1
COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
 
     0.605
pssA
COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes.
  
     0.599
EAQ66620.1
COG3515 Uncharacterized protein conserved in bacteria.
  
     0.545
EAQ67115.1
COG3248 Nucleoside-binding outer membrane protein.
  
     0.515
EAQ66721.1
COG0304 3-oxoacyl-(acyl-carrier-protein) synthase.
  
     0.462
thiP
Thiamin ABC transporter membrane component; COG1178 ABC-type Fe3+ transport system, permease component.
  
     0.438
EAQ67012.1
Hypothetical protein.
  
     0.421
EAQ67329.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
  
     0.407
EAQ67612.1
COG4405 Uncharacterized protein conserved in bacteria.
  
     0.407
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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