STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ67458.1Hypothetical protein; COG4166 ABC-type oligopeptide transport system, periplasmic component. (275 aa)    
Predicted Functional Partners:
EAQ66724.1
Probable oxidoreductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.736
EAQ66142.1
Probable oxidoreductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
     0.701
EAQ64446.1
Hypothetical protein.
 
 
  0.667
EAQ64977.1
Response regulator; COG0784 FOG: CheY-like receiver.
    
   0.659
EAQ67459.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
    0.630
EAQ64475.1
Hypothetical protein; COG0074 Succinyl-CoA synthetase, alpha subunit.
 
     0.626
EAQ66124.1
Similar to dioxygenase superfamily protein; COG0346 Lactoylglutathione lyase and related lyases.
 
     0.598
EAQ65853.1
Hypothetical protein; COG3128 Uncharacterized iron-regulated protein.
  
     0.585
EAQ63530.1
Glyoxalase family protein; COG0346 Lactoylglutathione lyase and related lyases.
 
     0.575
EAQ66547.1
Transcriptional regulator, putative; COG1396 Predicted transcriptional regulators.
  
 0.553
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.