Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAQ63123.1 | EAQ67578.1 | MED121_19676 | MED121_16664 | COG5009 Membrane carboxypeptidase/penicillin-binding protein. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.964 |
| EAQ63123.1 | ftsI | MED121_19676 | MED121_20361 | COG5009 Membrane carboxypeptidase/penicillin-binding protein. | Penicillin-binding protein 3; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.753 |
| EAQ63123.1 | mltG | MED121_19676 | MED121_00045 | COG5009 Membrane carboxypeptidase/penicillin-binding protein. | Predicted periplasmic solute-binding protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.665 |
| EAQ63123.1 | mrdA | MED121_19676 | MED121_13370 | COG5009 Membrane carboxypeptidase/penicillin-binding protein. | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.831 |
| EAQ63123.1 | mrdB | MED121_19676 | MED121_13365 | COG5009 Membrane carboxypeptidase/penicillin-binding protein. | Rod shape-determining protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.711 |
| EAQ63123.1 | murC | MED121_19676 | MED121_20326 | COG5009 Membrane carboxypeptidase/penicillin-binding protein. | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.696 |
| EAQ63156.1 | EAQ67578.1 | MED121_19706 | MED121_16664 | COG3087 Cell division protein. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.899 |
| EAQ63156.1 | ftsI | MED121_19706 | MED121_20361 | COG3087 Cell division protein. | Penicillin-binding protein 3; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.882 |
| EAQ63156.1 | mrdA | MED121_19706 | MED121_13370 | COG3087 Cell division protein. | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.719 |
| EAQ63156.1 | mrdB | MED121_19706 | MED121_13365 | COG3087 Cell division protein. | Rod shape-determining protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.723 |
| EAQ65386.1 | EAQ67578.1 | MED121_21982 | MED121_16664 | COG1792 Cell shape-determining protein. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.738 |
| EAQ65386.1 | ftsI | MED121_21982 | MED121_20361 | COG1792 Cell shape-determining protein. | Penicillin-binding protein 3; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.832 |
| EAQ65386.1 | mltG | MED121_21982 | MED121_00045 | COG1792 Cell shape-determining protein. | Predicted periplasmic solute-binding protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.617 |
| EAQ65386.1 | mrdA | MED121_21982 | MED121_13370 | COG1792 Cell shape-determining protein. | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.948 |
| EAQ65386.1 | mrdB | MED121_21982 | MED121_13365 | COG1792 Cell shape-determining protein. | Rod shape-determining protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.817 |
| EAQ65386.1 | murC | MED121_21982 | MED121_20326 | COG1792 Cell shape-determining protein. | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.768 |
| EAQ65774.1 | EAQ67578.1 | MED121_09418 | MED121_16664 | Hypothetical protein; COG3417 Collagen-binding surface adhesin SpaP (antigen I/II family). | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.848 |
| EAQ67175.1 | EAQ67578.1 | MED121_14649 | MED121_16664 | COG3087 Cell division protein. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.835 |
| EAQ67175.1 | ftsI | MED121_14649 | MED121_20361 | COG3087 Cell division protein. | Penicillin-binding protein 3; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.700 |
| EAQ67175.1 | mrdA | MED121_14649 | MED121_13370 | COG3087 Cell division protein. | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.700 |
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