STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ67630.1COG0464 ATPases of the AAA+ class. (543 aa)    
Predicted Functional Partners:
EAQ65578.1
Hypothetical protein.
   
 0.989
EAQ66100.1
Hypothetical protein.
  
 0.951
EAQ67631.1
Hypothetical protein.
 
     0.896
glpK
Probable carbohydrate kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
  0.893
EAQ66971.1
Hypothetical protein; COG0790 FOG: TPR repeat, SEL1 subfamily.
   
 0.834
EAQ66972.1
Hypothetical protein; COG0790 FOG: TPR repeat, SEL1 subfamily.
   
 0.834
EAQ65139.1
DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...]
  
 
 0.818
htpG
Heat shock protein HtpG; Molecular chaperone. Has ATPase activity.
   
 0.807
EAQ64019.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
 
 
 0.777
EAQ64021.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
 
 
 0.776
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.