STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ67793.1COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. (249 aa)    
Predicted Functional Partners:
EAQ67792.1
COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
  
 
0.957
EAQ67304.1
Probable sensor/response regulator hybrid; COG0642 Signal transduction histidine kinase.
 
 
 0.788
EAQ67672.1
ABC transporter, periplasmic substrate-binding protein-related protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.773
EAQ67768.1
COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.773
EAQ67765.1
Hypothetical protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.772
EAQ65831.1
Polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein, putative; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.768
EAQ67610.1
Hypothetical protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.765
EAQ67628.1
Putative ABC amino acid transporter solute binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.764
EAQ66105.1
Probable sensory transduction system regulatory protein; COG2199 FOG: GGDEF domain.
   
 0.761
EAQ63689.1
Hypothetical protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.761
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.