STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ65311.1Putrescine ABC transporter, periplasmic putrescine-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family. (411 aa)    
Predicted Functional Partners:
EAQ65307.1
COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
 0.997
potA
Putrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
 0.995
EAQ64964.1
COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
 0.986
EAQ65308.1
COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
 
 0.975
EAQ64963.1
COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
 
 0.962
EAQ64681.1
Putative ABC transporter, permease subunit; COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
 
 0.921
EAQ64962.1
Spermidine/putrescine ABC transporter, ATP-binding protein, putative; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 
 0.894
EAQ63503.1
Putative iron transport system ATP-binding protein; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 
 0.841
EAQ64680.1
Putative ABC transporter, permease subunit; COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
 
 0.834
EAQ64682.1
Putative ABC transporter, ATP-binding subunit; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.
 
 
 0.811
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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