STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ65321.1Hypothetical protein; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component. (344 aa)    
Predicted Functional Partners:
EAQ65320.1
Hypothetical protein; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
 
  
 0.954
EAQ65319.1
Probable transporter; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
 0.923
EAQ66897.1
Probable DctM (C4-dicarboxylate permease, large subunit); COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
 0.785
ddpX
D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.
 
     0.784
EAQ64891.1
TRAP dicarboxylate transporter, DctM subunit; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
 0.782
EAQ63669.1
Hypothetical protein; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
 0.781
EAQ66656.1
C4-dicarboxylate transporter family protein, DctM subunit; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
 0.781
EAQ67732.1
Probable DctM (C4-dicarboxylate permease, large subunit); COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
 0.780
EAQ67800.1
COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
 0.749
EAQ64896.1
Probable DctM (C4-dicarboxylate permease, large subunit); COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
 0.739
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.