STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ64222.1Aminotransferase, classes I and II; COG0436 Aspartate/tyrosine/aromatic aminotransferase. (388 aa)    
Predicted Functional Partners:
EAQ65465.1
COG0077 Prephenate dehydratase.
 
 
 0.924
EAQ66938.1
Chorismate mutase/prephenate dehydrogenase; COG1605 Chorismate mutase.
 
 
 0.887
EAQ64322.1
Glutamine amidotransferase, class-II; COG0069 Glutamate synthase domain 2.
    
 0.873
EAQ63116.1
Glutamate synthase large chain precursor; COG0067 Glutamate synthase domain 1.
    
 0.873
EAQ66937.1
COG0287 Prephenate dehydrogenase.
    
 0.861
EAQ66831.1
COG0372 Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.841
EAQ66667.1
B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase,repressor of metE and metF; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.834
mqo
Malate:quinone oxidoreductase; COG0579 Predicted dehydrogenase.
   
 
 0.830
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 
 0.828
EAQ63585.1
Aspartate kinase, monofunctional class; COG0527 Aspartokinases; Belongs to the aspartokinase family.
  
 0.803
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.