STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ64290.15-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). (298 aa)    
Predicted Functional Partners:
EAQ63315.1
COG3232 5-carboxymethyl-2-hydroxymuconate isomerase.
  
 
 0.880
EAQ64291.1
Hypothetical protein; COG0778 Nitroreductase.
  
    0.786
EAQ64495.1
Probable fumarase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.731
EAQ67447.1
COG3508 Homogentisate 1,2-dioxygenase.
  
  
 0.711
EAQ65566.1
FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal; COG0277 FAD/FMN-containing dehydrogenases.
  
 
 0.673
EAQ65567.1
FAD linked oxidase; COG0277 FAD/FMN-containing dehydrogenases.
  
 
 0.673
EAQ66676.1
Oxidoreductase, FAD-binding, putative; COG0277 FAD/FMN-containing dehydrogenases.
  
 
 0.673
EAQ66993.1
Fe-S oxidoreductase; COG0277 FAD/FMN-containing dehydrogenases.
  
 
 0.673
EAQ64289.1
COG2350 Uncharacterized protein conserved in bacteria.
 
     0.643
EAQ66828.1
COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 
 0.617
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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