Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAQ63394.1 | EAQ63395.1 | MED121_20436 | MED121_20441 | N-acetylmuramoyl-L-alanine amidase, family 3; COG0860 N-acetylmuramoyl-L-alanine amidase. | Putative nucleotide-binding protein; COG0802 Predicted ATPase or kinase. | 0.744 |
| EAQ63394.1 | EAQ63583.1 | MED121_20436 | MED121_20251 | N-acetylmuramoyl-L-alanine amidase, family 3; COG0860 N-acetylmuramoyl-L-alanine amidase. | Biosynthetic alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.635 |
| EAQ63394.1 | EAQ63720.1 | MED121_20436 | MED121_03447 | N-acetylmuramoyl-L-alanine amidase, family 3; COG0860 N-acetylmuramoyl-L-alanine amidase. | Amino acid adenylation; COG1020 Non-ribosomal peptide synthetase modules and related proteins. | 0.475 |
| EAQ63394.1 | EAQ63722.1 | MED121_20436 | MED121_03457 | N-acetylmuramoyl-L-alanine amidase, family 3; COG0860 N-acetylmuramoyl-L-alanine amidase. | Beta-ketoacyl synthase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. | 0.529 |
| EAQ63394.1 | EAQ63977.1 | MED121_20436 | MED121_20446 | N-acetylmuramoyl-L-alanine amidase, family 3; COG0860 N-acetylmuramoyl-L-alanine amidase. | Hypothetical protein; COG0802 Predicted ATPase or kinase. | 0.650 |
| EAQ63395.1 | EAQ63394.1 | MED121_20441 | MED121_20436 | Putative nucleotide-binding protein; COG0802 Predicted ATPase or kinase. | N-acetylmuramoyl-L-alanine amidase, family 3; COG0860 N-acetylmuramoyl-L-alanine amidase. | 0.744 |
| EAQ63395.1 | EAQ63583.1 | MED121_20441 | MED121_20251 | Putative nucleotide-binding protein; COG0802 Predicted ATPase or kinase. | Biosynthetic alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.700 |
| EAQ63395.1 | EAQ63720.1 | MED121_20441 | MED121_03447 | Putative nucleotide-binding protein; COG0802 Predicted ATPase or kinase. | Amino acid adenylation; COG1020 Non-ribosomal peptide synthetase modules and related proteins. | 0.859 |
| EAQ63395.1 | EAQ63722.1 | MED121_20441 | MED121_03457 | Putative nucleotide-binding protein; COG0802 Predicted ATPase or kinase. | Beta-ketoacyl synthase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. | 0.729 |
| EAQ63395.1 | EAQ63977.1 | MED121_20441 | MED121_20446 | Putative nucleotide-binding protein; COG0802 Predicted ATPase or kinase. | Hypothetical protein; COG0802 Predicted ATPase or kinase. | 0.625 |
| EAQ63395.1 | EAQ64104.1 | MED121_20441 | MED121_00690 | Putative nucleotide-binding protein; COG0802 Predicted ATPase or kinase. | Amino acid adenylation; COG1020 Non-ribosomal peptide synthetase modules and related proteins; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.729 |
| EAQ63395.1 | EAQ64582.1 | MED121_20441 | MED121_21565 | Putative nucleotide-binding protein; COG0802 Predicted ATPase or kinase. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.554 |
| EAQ63395.1 | EAQ67545.1 | MED121_20441 | MED121_16499 | Putative nucleotide-binding protein; COG0802 Predicted ATPase or kinase. | COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone. | 0.963 |
| EAQ63395.1 | metG | MED121_20441 | MED121_15184 | Putative nucleotide-binding protein; COG0802 Predicted ATPase or kinase. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.546 |
| EAQ63395.1 | tsaD | MED121_20441 | MED121_07535 | Putative nucleotide-binding protein; COG0802 Predicted ATPase or kinase. | Probable O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.896 |
| EAQ63583.1 | EAQ63394.1 | MED121_20251 | MED121_20436 | Biosynthetic alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | N-acetylmuramoyl-L-alanine amidase, family 3; COG0860 N-acetylmuramoyl-L-alanine amidase. | 0.635 |
| EAQ63583.1 | EAQ63395.1 | MED121_20251 | MED121_20441 | Biosynthetic alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Putative nucleotide-binding protein; COG0802 Predicted ATPase or kinase. | 0.700 |
| EAQ63583.1 | EAQ63720.1 | MED121_20251 | MED121_03447 | Biosynthetic alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Amino acid adenylation; COG1020 Non-ribosomal peptide synthetase modules and related proteins. | 0.977 |
| EAQ63583.1 | EAQ63722.1 | MED121_20251 | MED121_03457 | Biosynthetic alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Beta-ketoacyl synthase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. | 0.973 |
| EAQ63583.1 | EAQ63977.1 | MED121_20251 | MED121_20446 | Biosynthetic alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Hypothetical protein; COG0802 Predicted ATPase or kinase. | 0.700 |
page 1 of 4