STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ64583.1Hypothetical protein; COG2165 Type II secretory pathway, pseudopilin PulG; Belongs to the N-Me-Phe pilin family. (163 aa)    
Predicted Functional Partners:
EAQ64584.1
Protein transport protein HofB; COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
 
  
 0.851
EAQ64586.1
Type 4 prepilin-like proteins leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
   
 0.848
EAQ65206.1
General secretion pathway protein G; COG2165 Type II secretory pathway, pseudopilin PulG.
 
 
 0.823
EAQ64585.1
Hypothetical protein; COG1459 Type II secretory pathway, component PulF.
     
 0.815
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
       0.751
yacG
Hypothetical protein; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C- terminal domain of GyrB, which probably disrupts DNA binding by the gyrase.
       0.751
EAQ64590.1
COG0642 Signal transduction histidine kinase.
     
 0.664
EAQ64589.1
TPR repeat:Response regulator receiver; COG0784 FOG: CheY-like receiver.
       0.652
EAQ63120.1
Type IV pili biogenesis protein PilQ; COG4796 Type II secretory pathway, component HofQ; Belongs to the bacterial secretin family.
 
   
 0.512
EAQ65204.1
Hypothetical protein; COG2165 Type II secretory pathway, pseudopilin PulG.
   
 0.503
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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