STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ65397.1Diguanylate cyclase (GGDEF domain); COG2199 FOG: GGDEF domain. (363 aa)    
Predicted Functional Partners:
EAQ66236.1
Hybrid signal transduction histidine kinase and diguanylatecyclase/phosphodiesterase; COG0784 FOG: CheY-like receiver.
 
 0.932
EAQ66105.1
Probable sensory transduction system regulatory protein; COG2199 FOG: GGDEF domain.
 
0.924
EAQ67304.1
Probable sensor/response regulator hybrid; COG0642 Signal transduction histidine kinase.
 
 0.894
EAQ65037.1
Sensory protein with histidine kinase domain; COG2199 FOG: GGDEF domain.
 
 0.857
EAQ67809.1
GGDEF family protein; COG2199 FOG: GGDEF domain.
 
 
 0.854
EAQ64832.1
Two-component hybrid sensor and regulator; COG0642 Signal transduction histidine kinase.
 
 0.853
EAQ67275.1
Serine/threonine kinase with two-component sensor domain; COG0642 Signal transduction histidine kinase.
 
 
 0.852
EAQ65995.1
Sensory box sensor/GGDEF/EAL domain protein; COG2199 FOG: GGDEF domain.
 
  0.851
EAQ64035.1
Sensory box (GGDEF/EAL domain) regulatory protein; COG2200 FOG: EAL domain.
 0.850
EAQ66391.1
Hypothetical protein; COG2206 HD-GYP domain.
 
 
  0.845
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.