STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ65477.1Putative HugZ protein; COG0748 Putative heme iron utilization protein. (165 aa)    
Predicted Functional Partners:
EAQ63501.1
COG1840 ABC-type Fe3+ transport system, periplasmic component.
   
    0.716
EAQ63709.1
Putative ferrichrome-binding protein; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
  
    0.657
EAQ64211.1
Ferrichrome-binding protein; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
  
    0.657
EAQ64247.1
Iron (III) ABC transporter, periplasmic-binding protein; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
  
    0.657
EAQ63912.1
COG4771 Outer membrane receptor for ferrienterochelin and colicins.
 
  
 0.581
EAQ65476.1
Transcriptional Regulator, TetR family protein; COG1309 Transcriptional regulator.
       0.572
EAQ65479.1
Hypothetical protein.
 
     0.520
EAQ63712.1
ATP-binding protein of ferrichrome ABC transporter; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
  
  
 0.466
EAQ64212.1
iron(III) ABC transporter, ATP-binding protein; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
  
  
 0.466
EAQ64246.1
Fe uptake system permease; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
  
  
 0.466
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.