STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ65519.1Putative sodium/alanine symporter; COG1115 Na+/alanine symporter. (454 aa)    
Predicted Functional Partners:
EAQ66418.1
COG4786 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.537
EAQ66420.1
COG1749 Flagellar hook protein FlgE.
    
   0.537
EAQ67475.1
Putative Voltage-gated ClC-type chloride channel clcA; COG0038 Chloride channel protein EriC.
   
    0.459
EAQ67472.1
COG1183 Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
  0.447
EAQ67336.1
Sensor histidine kinase; COG0591 Na+/proline symporter.
   
  
 0.433
EAQ67246.1
Putative Sensory box histidine kinase/response regulator; COG0591 Na+/proline symporter.
   
  
 0.424
EAQ66057.1
Putative 2-methylcitrate synthase; COG0372 Citrate synthase; Belongs to the citrate synthase family.
   
  
 0.419
EAQ66831.1
COG0372 Citrate synthase; Belongs to the citrate synthase family.
   
  
 0.419
EAQ63299.1
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
   
    0.408
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
   
    0.407
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.