STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ64776.1Putative periplasmic binding abc transporter protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. (258 aa)    
Predicted Functional Partners:
EAQ63445.1
Amino acid ABC transporter, permease protein, 3-TM region,His/Glu/Gln/Arg/opine; COG4215 ABC-type arginine transport system, permease component.
 0.987
EAQ63444.1
ABC basic amino acid transporter, inner membrane subunit; COG4160 ABC-type arginine/histidine transport system, permease component.
 
 0.977
EAQ64775.1
Histidine transport ATP-binding protein HisP; COG4598 ABC-type histidine transport system, ATPase component.
 
 
 0.974
EAQ63575.1
COG0765 ABC-type amino acid transport system, permease component.
 0.957
EAQ63574.1
COG0765 ABC-type amino acid transport system, permease component.
 0.955
EAQ64777.1
COG4215 ABC-type arginine transport system, permease component.
 0.954
EAQ63447.1
Probable ATP-binding component of ABC transporter; COG4598 ABC-type histidine transport system, ATPase component.
 
 
 0.937
EAQ64778.1
Polar amino acid uptake family ABC transporter, permease protein; COG4160 ABC-type arginine/histidine transport system, permease component.
 
 0.919
EAQ63576.1
Putative amino acid ABC transporter, ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.902
EAQ65027.1
ABC glutamate/glutamine/aspartate/asparagine transporter, ATPase subunit bztD; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.895
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.