Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAR21491.1 | EAR21492.1 | NB231_01234 | NB231_01239 | Transposase. | Putative IS4 family transposase; COG5659 FOG: Transposase. | 0.453 |
EAR21492.1 | EAR21491.1 | NB231_01239 | NB231_01234 | Putative IS4 family transposase; COG5659 FOG: Transposase. | Transposase. | 0.453 |
EAR21492.1 | EAR21493.1 | NB231_01239 | NB231_01244 | Putative IS4 family transposase; COG5659 FOG: Transposase. | IS298, transposase OrfA; COG3293 Transposase and inactivated derivatives. | 0.680 |
EAR21492.1 | EAR22206.1 | NB231_01239 | NB231_04835 | Putative IS4 family transposase; COG5659 FOG: Transposase. | COG3293 Transposase and inactivated derivatives. | 0.433 |
EAR21492.1 | EAR23329.1 | NB231_01239 | NB231_15953 | Putative IS4 family transposase; COG5659 FOG: Transposase. | pglY. | 0.612 |
EAR21493.1 | EAR21492.1 | NB231_01244 | NB231_01239 | IS298, transposase OrfA; COG3293 Transposase and inactivated derivatives. | Putative IS4 family transposase; COG5659 FOG: Transposase. | 0.680 |
EAR22206.1 | EAR21492.1 | NB231_04835 | NB231_01239 | COG3293 Transposase and inactivated derivatives. | Putative IS4 family transposase; COG5659 FOG: Transposase. | 0.433 |
EAR23329.1 | EAR21492.1 | NB231_15953 | NB231_01239 | pglY. | Putative IS4 family transposase; COG5659 FOG: Transposase. | 0.612 |