STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vapCPlasmid stability-like protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (140 aa)    
Predicted Functional Partners:
EAR20637.1
Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.950
EAR22418.1
COG4691 Plasmid stability protein.
  
 
   0.814
EAR20325.1
Hypothetical protein.
 
 
   0.478
EAR20638.1
Hypothetical protein; COG0358 DNA primase (bacterial type).
       0.469
EAR20293.1
Hypothetical protein.
   
   0.462
EAR20765.1
COG4456 Virulence-associated protein and related proteins.
   
   0.418
EAR23327.1
COG4456 Virulence-associated protein and related proteins.
   
   0.418
Your Current Organism:
Nitrococcus mobilis
NCBI taxonomy Id: 314278
Other names: N. mobilis Nb-231, Nitrococcus mobilis Nb-231, Nitrococcus mobilis str. Nb-231, Nitrococcus mobilis strain Nb-231
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.