STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR21568.1Hypothetical protein. (120 aa)    
Predicted Functional Partners:
EAR21569.1
COG4913 Uncharacterized protein conserved in bacteria.
 
     0.955
EAR21570.1
Hypothetical protein.
 
   
 0.953
EAR21571.1
Transcriptional Regulator, PadR-like family protein; COG1695 Predicted transcriptional regulators.
       0.463
EAR21572.1
Probable transporter; COG2059 Chromate transport protein ChrA.
       0.463
EAR22564.1
Hypothetical protein.
  
     0.446
EAR23490.1
Hypothetical protein; COG0556 Helicase subunit of the DNA excision repair complex.
  
     0.403
Your Current Organism:
Nitrococcus mobilis
NCBI taxonomy Id: 314278
Other names: N. mobilis Nb-231, Nitrococcus mobilis Nb-231, Nitrococcus mobilis str. Nb-231, Nitrococcus mobilis strain Nb-231
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.