STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR21664.1Chain length determinant protein; COG3524 Capsule polysaccharide export protein. (361 aa)    
Predicted Functional Partners:
EAR21665.1
COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
 
 
 0.998
EAR21666.1
ABC 2 transport system integral membrane protein; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
 
 0.998
EAR21667.1
Capsular polysaccharide transport protein, putative; COG1596 Periplasmic protein involved in polysaccharide export.
 
  
 0.971
EAR21637.1
COG3563 Capsule polysaccharide export protein.
 
  
 0.967
EAR21636.1
KpsS protein; COG3562 Capsule polysaccharide export protein.
 
 
 
 0.862
EAR21277.1
Putative polysaccharide export protein, outer membrane; COG1596 Periplasmic protein involved in polysaccharide export.
  
  
 0.722
EAR22755.1
COG1596 Periplasmic protein involved in polysaccharide export.
  
  
 0.722
EAR21640.1
Hypothetical protein.
  
     0.673
EAR21668.1
Hypothetical protein.
       0.606
EAR21660.1
Smc1; COG1196 Chromosome segregation ATPases.
 
     0.556
Your Current Organism:
Nitrococcus mobilis
NCBI taxonomy Id: 314278
Other names: N. mobilis Nb-231, Nitrococcus mobilis Nb-231, Nitrococcus mobilis str. Nb-231, Nitrococcus mobilis strain Nb-231
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.