STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR20304.1FAD linked oxidase-like protein; COG0277 FAD/FMN-containing dehydrogenases. (357 aa)    
Predicted Functional Partners:
EAR20305.1
Hypothetical protein; COG0247 Fe-S oxidoreductase.
 
 0.999
EAR21676.1
Glycolate oxidase, subunit GlcD; COG0277 FAD/FMN-containing dehydrogenases.
  
  0.991
EAR20303.1
Glycolate oxidase, subunit GlcD; COG0277 FAD/FMN-containing dehydrogenases.
     0.983
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
 
 0.931
EAR22133.1
COG1052 Lactate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.882
EAR20932.1
COG2224 Isocitrate lyase.
     
 0.855
EAR21397.1
2-phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
     
 0.854
EAR21404.1
COG0277 FAD/FMN-containing dehydrogenases.
  
 
0.799
EAR22837.1
Phosphate acetyltransferase; COG0281 Malic enzyme.
  
 
 0.794
EAR20306.1
COG2897 Rhodanese-related sulfurtransferase.
    
  0.788
Your Current Organism:
Nitrococcus mobilis
NCBI taxonomy Id: 314278
Other names: N. mobilis Nb-231, Nitrococcus mobilis Nb-231, Nitrococcus mobilis str. Nb-231, Nitrococcus mobilis strain Nb-231
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