STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR20305.1Hypothetical protein; COG0247 Fe-S oxidoreductase. (412 aa)    
Predicted Functional Partners:
EAR20304.1
FAD linked oxidase-like protein; COG0277 FAD/FMN-containing dehydrogenases.
 
 0.999
EAR21676.1
Glycolate oxidase, subunit GlcD; COG0277 FAD/FMN-containing dehydrogenases.
 
 0.988
EAR20303.1
Glycolate oxidase, subunit GlcD; COG0277 FAD/FMN-containing dehydrogenases.
 
 0.981
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
 
 0.942
EAR22518.1
COG0067 Glutamate synthase domain 1.
    
 0.923
EAR20932.1
COG2224 Isocitrate lyase.
     
 0.873
EAR22133.1
COG1052 Lactate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.867
EAR21404.1
COG0277 FAD/FMN-containing dehydrogenases.
 
 0.849
EAR22837.1
Phosphate acetyltransferase; COG0281 Malic enzyme.
 
 
 0.848
EAR20306.1
COG2897 Rhodanese-related sulfurtransferase.
    
 0.837
Your Current Organism:
Nitrococcus mobilis
NCBI taxonomy Id: 314278
Other names: N. mobilis Nb-231, Nitrococcus mobilis Nb-231, Nitrococcus mobilis str. Nb-231, Nitrococcus mobilis strain Nb-231
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